Contribute to BIAFLOWS

Last updated: March 3nd, 2020

How to contribute

There are many ways to contribute to BIAFLOWS, from providing annotated images to packaging workflows, spreading the words, fixing bugs, and further improving the documentation.

Annotated Images

Scientists can contribute annotated images representative of a specific experiment to BIAFLOWS online instance (send a request to biaflows@neubias.org), or setup their own BIAFLOWS instance to share these images.

See Problem classes, ground truth annotations and reported metrics from the documentation portal for guidelines on how to format the ground truth annotations of your images.

Worflows

Workflow developers can encapsulate their code following our developer guidelines, test them on a local BIAFLOWS instance on public images migrated to their local server (using our migration tool), or publish their source code on GitHub to showcase their workflows in BIAFLOWS online instance.

Follow Creating a BIA workflow and adding it to a BIAFLOWS instance from the documentation portal and submit contributions to biaflows@neubias.org.

Feature requests / bug reports

Feature requests or bug reports can be posted to BIAFLOWS GitHub.

Share your experience

Share your experience with us and others, help other researchers on the image.sc forum.

Documentation improvement

Contribute to the documentation by submitting a pull request to our documentation repository.

Cite and link BIAFLOWS

Cite and link BIAFLOWS content to share data and results accompanying your scientific publications.

Follow BIAFLOWS from a Jupyter notebook from the documentation portal, or directly link the webpages of your BIAFLOWS instance.